Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs7978196 chr12:86944182 C/T 0 119 38.13 59.63 4.13 KM Plot
THYM rs79808012 chr1:227440977 G/A 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs79836090 chr4:70240243 T/C 6.15E-13 118 41.77 42.3 6 KM Plot
THYM rs79850203 chr4:115550514 C/G 0 118 38.23 46.27 4.13 KM Plot
THYM rs79850871 chr12:86985077 G/A 0 119 38.13 59.63 4.13 KM Plot
THYM rs798722 chr4:1699864 G/A 0.000285 117 49.75 37.98 27.1 KM Plot
THYM rs79932635 chr12:24396029 T/C 7.12E-5 115 39.75 40.52 28.43 KM Plot
THYM rs7994402 chr13:26631939 C/T 3.01E-6 118 41.77 40.67 13.75 KM Plot
THYM rs79975718 chr2:30862386 C/T 1.38E-8 119 36.03 50.13 33.13 KM Plot
THYM rs7997651 chr13:26632013 G/T 3.01E-6 118 41.77 40.67 13.75 KM Plot
THYM rs80038253 chr8:2641921 A/G 1.77E-8 115 46.27 26 12.63 KM Plot
THYM rs80063446 chr12:128738368 C/T 5.31E-6 118 39.75 50.07 25.83 KM Plot
THYM rs80098119 chr9:97228848 G/A 8.1E-5 119 40.67 44.3 17.03 KM Plot
THYM rs8009937 chr14:78291028 T/C 0.000164 119 24.17 46.43 38.33 KM Plot
THYM rs8010212 chr14:78337736 A/G 1.46E-5 117 22.5 48.33 38.23 KM Plot